[←][→] ath   AT1G07705 Gene
functional annotation
Function   NOT2 / NOT3 / NOT5 family  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0030015 [list] [network] CCR4-NOT core complex  (14 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001077478.1  NP_563795.3 
BLAST NP_001077478.1  NP_563795.3 
Orthologous [Ortholog page] VIP2 (ath)  LOC4330931 (osa)  LOC4334027 (osa)  LOC11418070 (mtr)  LOC25492462 (mtr)  LOC100248449 (vvi)  LOC100263354 (vvi)  LOC100281429 (zma)  LOC100381661 (zma)  LOC100776413 (gma)  LOC100783662 (gma)  LOC100806559 (gma)  LOC100807026 (gma)  LOC101256781 (sly)  LOC101258724 (sly)  LOC103851558 (bra)  LOC103856612 (bra)  LOC103871522 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 3  (predict for NP_001077478.1)
nucl 7,  chlo 2  (predict for NP_563795.3)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001077478.1)
chlo 8  (predict for NP_563795.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
ath03013 RNA transport 2
Genes directly connected with AT1G07705 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT5G63120 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836432
6.4 AT3G61240 DEA(D/H)-box RNA helicase family protein [detail] 825296
6.4 AT2G45810 DEA(D/H)-box RNA helicase family protein [detail] 819189
5.9 AT2G46060 transmembrane protein-like protein [detail] 819214
5.4 PTB3 polypyrimidine tract-binding protein 3 [detail] 840918
4.9 AT5G54920 polyadenylate-binding protein interacting protein [detail] 835583
4.6 AT1G26190 Phosphoribulokinase / Uridine kinase family [detail] 839160
Coexpressed
gene list		 [Coexpressed gene list for AT1G07705]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261465_at
261465_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261465_at
261465_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261465_at
261465_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837284      
Refseq ID (protein) NP_001077478.1 
NP_563795.3 


The preparation time of this page was 0.2 [sec].