[←][→] sly   778355 Gene
functional annotation
Function   DNA damage-binding protein 1  
GO BP
GO CC
GO MF
KEGG sly03420 [list] [network] Nucleotide excision repair (61 genes)
sly04120 [list] [network] Ubiquitin mediated proteolysis (145 genes)
Protein NP_001234275.1  XP_010315587.1 
BLAST NP_001234275.1  XP_010315587.1 
Orthologous [Ortholog page] DDB1A (ath)  DDB1B (ath)  LOC4339794 (osa)  LOC7470811 (ppo)  LOC11435521 (mtr)  LOC100256664 (vvi)  LOC100279448 (zma)  LOC100777459 (gma)  LOC103635427 (zma)  LOC103834207 (bra)  LOC103839745 (bra) 
Subcellular
localization
wolf
cyto 4,  plas 2,  cyto_pero 2,  chlo 1,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  chlo_mito 1,  E.R._vacu 1  (predict for NP_001234275.1)
cyto 4,  plas 2,  cyto_pero 2,  nucl 1,  E.R._plas 1,  mito_plas 1  (predict for XP_010315587.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001234275.1)
other 7  (predict for XP_010315587.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
sly03013 RNA transport 2
Genes directly connected with DDB1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 LOC101255836 cullin-associated NEDD8-dissociated protein 1 [detail] 101255836
8.1 LOC101249691 uncharacterized LOC101249691 [detail] 101249691
8.0 LOC101261833 pre-mRNA-processing-splicing factor 8A [detail] 101261833
7.2 LOC101245924 general negative regulator of transcription subunit 3 [detail] 101245924
6.9 LOC101268441 nuclear pore complex protein NUP214 [detail] 101268441
6.1 LOC101261473 nardilysin-like [detail] 101261473
6.0 LOC101243943 chromodomain-helicase-DNA-binding protein 3 [detail] 101243943
5.9 LOC101264306 HBS1-like protein [detail] 101264306
5.8 LOC101245852 la-related protein 1A [detail] 101245852
5.4 LOC101261530 uncharacterized LOC101261530 [detail] 101261530
5.3 LOC101252600 rab3 GTPase-activating protein catalytic subunit [detail] 101252600
4.7 LOC101251032 pentatricopeptide repeat-containing protein At3g22670, mitochondrial [detail] 101251032
4.3 LOC101055593 RNA-dependent RNA polymerase 6 [detail] 101055593
Coexpressed
gene list		 [Coexpressed gene list for DDB1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 778355      
Refseq ID (protein) NP_001234275.1 
XP_010315587.1 


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