[←][→] ath   AT4G05420 Gene
functional annotation
Function   damaged DNA binding protein 1A  
GO BP
GO:0010100 [list] [network] negative regulation of photomorphogenesis  (13 genes)  IGI  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IEA  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IPI  
GO:0006281 [list] [network] DNA repair  (295 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  IPI  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA IPI ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001118940.1  NP_192451.1 
BLAST NP_001118940.1  NP_192451.1 
Orthologous [Ortholog page] DDB1 (sly)  DDB1B (ath)  LOC4339794 (osa)  LOC7470811 (ppo)  LOC11435521 (mtr)  LOC100256664 (vvi)  LOC100279448 (zma)  LOC100777459 (gma)  LOC103635427 (zma)  LOC103834207 (bra)  LOC103839745 (bra) 
Subcellular
localization
wolf
cyto 4,  plas 2,  cyto_E.R. 2,  nucl 1,  vacu 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001118940.1)
cyto 4,  plas 2,  cyto_E.R. 2,  nucl 1,  vacu 1,  E.R._plas 1,  mito_plas 1  (predict for NP_192451.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001118940.1)
other 5  (predict for NP_192451.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with DDB1A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 AT3G52250 Duplicated homeodomain-like superfamily protein [detail] 824390
7.9 AT5G47690 binding protein [detail] 834820
7.7 AT1G09620 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase [detail] 837489
7.0 AT1G78880 Ubiquitin-specific protease family C19-related protein [detail] 844225
5.8 AT1G71350 eukaryotic translation initiation factor SUI1 family protein [detail] 843476
Coexpressed
gene list		 [Coexpressed gene list for DDB1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255226_at
255226_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255226_at
255226_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255226_at
255226_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825890      
Refseq ID (protein) NP_001118940.1 
NP_192451.1 


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