[←][→] ath   AT2G44680 Gene
functional annotation
Function   casein kinase II beta subunit 4  
GO BP
GO:0042753 [list] [network] positive regulation of circadian rhythm  (12 genes)  IMP  
GO:0048573 [list] [network] photoperiodism, flowering  (67 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (111 genes)  IMP  
GO CC
GO:0005956 [list] [network] protein kinase CK2 complex  (6 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA IDA  
GO MF
GO:0019887 [list] [network] protein kinase regulator activity  (77 genes)  IBA  
GO:0004674 [list] [network] protein serine/threonine kinase activity  (801 genes)  IBA IMP  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_001323623.1  NP_181996.1  NP_850421.1 
BLAST NP_001323623.1  NP_181996.1  NP_850421.1 
Orthologous [Ortholog page] LOC541823 (zma)  LOC541824 (zma)  LOC542628 (zma)  CKB3 (ath)  CKB2 (ath)  CKB1 (ath)  LOC4343287 (osa)  LOC4349414 (osa)  LOC7483807 (ppo)  LOC11430161 (mtr)  LOC25493577 (mtr)  LOC100262569 (vvi)  LOC100266745 (vvi)  LOC100283448 (zma)  LOC100780095 (gma)  LOC100784848 (gma)  LOC100793573 (gma)  LOC100799304 (gma)  LOC101245655 (sly)  LOC101246833 (sly)  LOC101249856 (sly)  LOC101257119 (sly)  LOC103830251 (bra)  LOC103841878 (bra)  LOC103855586 (bra)  LOC103858139 (bra)  LOC103860926 (bra)  LOC103866823 (bra) 
Subcellular
localization
wolf
nucl 5,  extr 2,  chlo 1,  cyto 1,  mito 1  (predict for NP_001323623.1)
nucl 6,  cyto 1,  extr 1  (predict for NP_181996.1)
nucl 6,  cyto 1,  extr 1  (predict for NP_850421.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_001323623.1)
other 6,  chlo 3  (predict for NP_181996.1)
other 6,  chlo 3  (predict for NP_850421.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath04712 Circadian rhythm - plant 3
ath03015 mRNA surveillance pathway 3
ath04144 Endocytosis 2
Genes directly connected with CKB4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 CKB3 casein kinase II beta chain 3 [detail] 825196
5.7 AT4G17270 Mo25 family protein [detail] 827441
5.4 AT5G18940 Mo25 family protein [detail] 832012
4.8 FBW2 F-BOX WITH WD-40 2 [detail] 826476
4.6 AT2G18240 Rer1 family protein [detail] 816339
4.2 ARPC3 actin-related protein C3 [detail] 842338
Coexpressed
gene list		 [Coexpressed gene list for CKB4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266881_at
266881_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266881_at
266881_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266881_at
266881_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819076      
Refseq ID (protein) NP_001323623.1 
NP_181996.1 
NP_850421.1 


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