[←][→] ath   AT3G60250 Gene
functional annotation
Function   casein kinase II beta chain 3  
GO BP
GO:0042752 [list] [network] regulation of circadian rhythm  (57 genes)  IMP  
GO:0045859 [list] [network] regulation of protein kinase activity  (119 genes)  IDA  
GO CC
GO:0005956 [list] [network] protein kinase CK2 complex  (6 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0019887 [list] [network] protein kinase regulator activity  (77 genes)  IDA  
GO:0008134 [list] [network] transcription factor binding  (173 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_001118861.1  NP_001325549.1  NP_191584.1 
BLAST NP_001118861.1  NP_001325549.1  NP_191584.1 
Orthologous [Ortholog page] LOC541823 (zma)  LOC541824 (zma)  LOC542628 (zma)  CKB4 (ath)  CKB2 (ath)  CKB1 (ath)  LOC4343287 (osa)  LOC4349414 (osa)  LOC7483807 (ppo)  LOC11430161 (mtr)  LOC25493577 (mtr)  LOC100262569 (vvi)  LOC100266745 (vvi)  LOC100283448 (zma)  LOC100780095 (gma)  LOC100784848 (gma)  LOC100793573 (gma)  LOC100799304 (gma)  LOC101245655 (sly)  LOC101246833 (sly)  LOC101249856 (sly)  LOC101257119 (sly)  LOC103830251 (bra)  LOC103841878 (bra)  LOC103855586 (bra)  LOC103858139 (bra)  LOC103860926 (bra)  LOC103866823 (bra) 
Subcellular
localization
wolf
nucl 6,  mito 2,  chlo 1,  cyto 1,  extr 1  (predict for NP_001118861.1)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001325549.1)
nucl 6,  mito 2,  chlo 1,  cyto 1,  extr 1  (predict for NP_191584.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001118861.1)
other 5,  chlo 3  (predict for NP_001325549.1)
other 5,  chlo 3  (predict for NP_191584.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath04712 Circadian rhythm - plant 3
Genes directly connected with CKB3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT5G23590 DNAJ heat shock N-terminal domain-containing protein [detail] 832425
6.4 AT3G25910 MAP kinase kinase kinase, putative (DUF1644) [detail] 822188
6.4 CKB4 casein kinase II beta subunit 4 [detail] 819076
5.7 CKB1 casein kinase II beta chain 1 [detail] 834754
5.1 FBW2 F-BOX WITH WD-40 2 [detail] 826476
3.9 AT2G28130 actin protein 2/3 complex subunit-like protein [detail] 817359
Coexpressed
gene list		 [Coexpressed gene list for CKB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251411_at
251411_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251411_at
251411_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251411_at
251411_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825196      
Refseq ID (protein) NP_001118861.1 
NP_001325549.1 
NP_191584.1 


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