[←][→] ath   AT1G20010 Gene
functional annotation
Function   tubulin beta-5 chain  
GO BP
GO:0000226 [list] [network] microtubule cytoskeleton organization  (134 genes)  IBA  
GO:0007017 [list] [network] microtubule-based process  (183 genes)  IBA ISS  
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  IBA  
GO CC
GO:0045298 [list] [network] tubulin complex  (13 genes)  ISS  
GO:0005874 [list] [network] microtubule  (186 genes)  IBA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0005200 [list] [network] structural constituent of cytoskeleton  (30 genes)  IBA ISS  
GO:0003924 [list] [network] GTPase activity  (169 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04145 [list] [network] Phagosome (82 genes)
Protein NP_564101.1 
BLAST NP_564101.1 
Orthologous [Ortholog page] LOC542239 (zma)  LOC542380 (zma)  LOC542416 (zma)  LOC542417 (zma)  LOC542418 (zma)  LOC542705 (zma)  TUBB3 (gma)  TUBB (gma)  TUB (sly)  TUB7 (ath)  TUB9 (ath)  TUB6 (ath)  TUB8 (ath)  TUB4 (ath)  TUB2 (ath)  TUB3 (ath)  TUB1 (ath)  LOC4326917 (osa)  LOC4327550 (osa)  LOC4328420 (osa)  LOC4331315 (osa)  LOC4333632 (osa)  LOC4334309 (osa)  LOC4338790 (osa)  LOC4341810 (osa)  LOC7464075 (ppo)  LOC7465852 (ppo)  LOC7465861 (ppo)  LOC7471684 (ppo)  LOC7472769 (ppo)  LOC7477677 (ppo)  LOC7479116 (ppo)  LOC7479658 (ppo)  LOC7481503 (ppo)  LOC7486729 (ppo)  LOC11414871 (mtr)  LOC11415767 (mtr)  LOC11422693 (mtr)  LOC11425110 (mtr)  LOC11437601 (mtr)  LOC11438618 (mtr)  LOC11439086 (mtr)  LOC11442516 (mtr)  LOC25491473 (mtr)  LOC25493371 (mtr)  LOC100244399 (vvi)  LOC100244729 (vvi)  LOC100247828 (vvi)  LOC100258042 (vvi)  LOC100259087 (vvi)  LOC100259401 (vvi)  LOC100259534 (vvi)  LOC100260443 (vvi)  LOC100261736 (vvi)  LOC100265052 (vvi)  LOC100272336 (zma)  LOC100273658 (zma)  LOC100382290 (zma)  LOC100383576 (zma)  LOC100502086 (zma)  TUBB1 (gma)  LOC100781043 (gma)  LOC100781525 (gma)  LOC100784236 (gma)  LOC100788253 (gma)  LOC100793406 (gma)  LOC100797652 (gma)  LOC100797894 (gma)  LOC100798849 (gma)  LOC100801608 (gma)  TUBB2 (gma)  LOC100816898 (gma)  LOC100818878 (gma)  LOC100819408 (gma)  LOC100819883 (gma)  LOC101246411 (sly)  LOC101248630 (sly)  LOC101248956 (sly)  LOC101251552 (sly)  LOC101252240 (sly)  LOC101253952 (sly)  LOC101262621 (sly)  LOC101262728 (sly)  LOC101265829 (sly)  LOC103625832 (zma)  LOC103629648 (zma)  LOC103827910 (bra)  LOC103832026 (bra)  LOC103834176 (bra)  LOC103839187 (bra)  LOC103846653 (bra)  LOC103848440 (bra)  LOC103858467 (bra)  LOC103861207 (bra)  LOC103864974 (bra)  LOC103867806 (bra)  LOC103868027 (bra)  LOC103873285 (bra)  LOC103873591 (bra)  LOC103873913 (bra)  LOC103874246 (bra)  LOC103874709 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3  (predict for NP_564101.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564101.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 4
Genes directly connected with TUB5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 TUA3 tubulin alpha-3 [detail] 832097
6.5 ELP extensin-like protein [detail] 837761
6.4 NPH3 Phototropic-responsive NPH3 family protein [detail] 836554
6.4 BGAL10 beta-galactosidase 10 [detail] 836501
5.9 WNK1 with no lysine (K) kinase 1 [detail] 819651
5.7 AT4G33625 vacuole protein [detail] 829503
5.4 XYL1 alpha-xylosidase 1 [detail] 843185
4.3 HB2 hemoglobin 2 [detail] 820216
Coexpressed
gene list		 [Coexpressed gene list for TUB5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261230_at
261230_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261230_at
261230_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261230_at
261230_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838590      
Refseq ID (protein) NP_564101.1 


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