[←][→] ath   AT1G06570 Gene
functional annotation
Function   4-hydroxyphenylpyruvate dioxygenase  
GO BP
GO:0010236 [list] [network] plastoquinone biosynthetic process  (7 genes)  IMP  
GO:0006559 [list] [network] L-phenylalanine catabolic process  (9 genes)  IEA  
GO:0010189 [list] [network] vitamin E biosynthetic process  (9 genes)  IMP  
GO:0016117 [list] [network] carotenoid biosynthetic process  (34 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IDA IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM NAS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003868 [list] [network] 4-hydroxyphenylpyruvate dioxygenase activity  (1 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (288 genes)  IPI  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (38 genes)
ath00350 [list] [network] Tyrosine metabolism (40 genes)
ath00360 [list] [network] Phenylalanine metabolism (32 genes)
Protein NP_001154311.1  NP_172144.3 
BLAST NP_001154311.1  NP_172144.3 
Orthologous [Ortholog page] LOC606444 (zma)  LOC4328425 (osa)  LOC7480718 (ppo)  LOC11433008 (mtr)  LOC11442258 (mtr)  LOC25482149 (mtr)  HPPD (gma)  LOC100248785 (vvi)  LOC101245475 (sly)  LOC101257377 (sly)  LOC103843547 (bra)  LOC103844028 (bra) 
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for NP_001154311.1)
cysk 9  (predict for NP_172144.3)
Subcellular
localization
TargetP
mito 8  (predict for NP_001154311.1)
other 8,  chlo 4  (predict for NP_172144.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath00350 Tyrosine metabolism 3
ath00640 Propanoate metabolism 3
ath00270 Cysteine and methionine metabolism 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Genes directly connected with PDS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.6 HGO homogentisate 1,2-dioxygenase [detail] 835494
7.7 IVD isovaleryl-CoA-dehydrogenase [detail] 823668
7.4 MCCA methylcrotonyl-CoA carboxylase alpha chain [detail] 838362
6.7 TAT7 Tyrosine transaminase family protein [detail] 835480
6.2 AT2G15695 peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53) [detail] 816063
5.6 MGL methionine gamma-lyase [detail] 842774
5.2 AT1G19400 Erythronate-4-phosphate dehydrogenase family protein [detail] 838523
5.1 AT5G01880 RING/U-box superfamily protein [detail] 831691
4.9 CXE12 alpha/beta-Hydrolases superfamily protein [detail] 824030
Coexpressed
gene list		 [Coexpressed gene list for PDS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262635_at
262635_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262635_at
262635_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262635_at
262635_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837168      
Refseq ID (protein) NP_001154311.1 
NP_172144.3 


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