[←][→] ath   AT1G06580 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO MF
KEGG
Protein NP_001320555.1  NP_001320556.1  NP_172145.1 
BLAST NP_001320555.1  NP_001320556.1  NP_172145.1 
Orthologous [Ortholog page] AT3G16710 (ath)  AT3G22470 (ath)  AT4G26800 (ath)  AT5G16640 (ath)  AT5G41170 (ath)  AT1G12300 (ath)  AT1G12620 (ath)  RPF1 (ath)  AT1G62590 (ath)  RPF2 (ath)  AT1G62680 (ath)  NG1 (ath)  AT1G62910 (ath)  RPF3 (ath)  AT1G63070 (ath)  AT1G63080 (ath)  AT1G63130 (ath)  AT1G63150 (ath)  AT1G63330 (ath)  AT1G63400 (ath)  AT1G64580 (ath)  AT1G12775 (ath)  LOC7455414 (ppo)  LOC7465949 (ppo)  LOC7497413 (ppo)  AT1G62914 (ath)  AT1G64583 (ath)  LOC11409172 (mtr)  LOC11411617 (mtr)  LOC11411874 (mtr)  LOC11413784 (mtr)  LOC11414076 (mtr)  LOC11416151 (mtr)  LOC11417300 (mtr)  LOC11419137 (mtr)  LOC11419300 (mtr)  LOC11419320 (mtr)  LOC11420208 (mtr)  LOC11422222 (mtr)  LOC11430397 (mtr)  LOC11436467 (mtr)  LOC11439118 (mtr)  LOC25479607 (mtr)  LOC25479611 (mtr)  LOC25479678 (mtr)  LOC25480002 (mtr)  LOC25480323 (mtr)  LOC25480558 (mtr)  LOC25480855 (mtr)  LOC25481060 (mtr)  LOC25481299 (mtr)  LOC25481803 (mtr)  LOC25482431 (mtr)  LOC25483258 (mtr)  LOC25496585 (mtr)  LOC25496655 (mtr)  LOC25496724 (mtr)  LOC25496733 (mtr)  LOC25496736 (mtr)  LOC25496740 (mtr)  LOC25496751 (mtr)  LOC25496764 (mtr)  LOC25496765 (mtr)  LOC25497066 (mtr)  LOC25497290 (mtr)  LOC25497361 (mtr)  LOC100243276 (vvi)  LOC100244236 (vvi)  LOC100246659 (vvi)  LOC100252034 (vvi)  LOC100253509 (vvi)  LOC100255400 (vvi)  LOC100256928 (vvi)  LOC100258882 (vvi)  LOC100265584 (vvi)  LOC100777512 (gma)  LOC100777919 (gma)  LOC100778062 (gma)  LOC100778420 (gma)  LOC100781818 (gma)  LOC100789435 (gma)  LOC100793769 (gma)  LOC100795807 (gma)  LOC100796249 (gma)  LOC100807278 (gma)  LOC100811076 (gma)  LOC100811865 (gma)  LOC100812093 (gma)  LOC100813712 (gma)  LOC100818504 (gma)  LOC100852554 (vvi)  LOC101244875 (sly)  LOC101248205 (sly)  LOC101256290 (sly)  LOC101263217 (sly)  LOC101266330 (sly)  LOC102663208 (gma)  LOC102669831 (gma)  LOC103833524 (bra)  LOC103836144 (bra)  LOC103836146 (bra)  LOC103836151 (bra)  LOC103838039 (bra)  LOC103838041 (bra)  LOC103838174 (bra)  LOC103838255 (bra)  LOC103838258 (bra)  LOC103838282 (bra)  LOC103838376 (bra)  LOC103839829 (bra)  LOC103843088 (bra)  LOC103843103 (bra)  LOC103843107 (bra)  LOC103843127 (bra)  LOC103843546 (bra)  LOC103846313 (bra)  LOC103864061 (bra)  LOC103866658 (bra)  LOC103871206 (bra)  LOC104879278 (vvi)  LOC106796589 (gma)  LOC112417994 (mtr)  LOC112422668 (mtr)  LOC112999808 (gma) 
Subcellular
localization
wolf
cyto 5,  cysk 1,  chlo 1,  plas 1,  extr 1,  E.R. 1,  golg 1,  cysk_nucl 1,  golg_plas 1,  E.R._plas 1  (predict for NP_001320555.1)
cyto 5,  cysk 1,  chlo 1,  plas 1,  extr 1,  E.R. 1,  golg 1,  cysk_nucl 1,  golg_plas 1,  E.R._plas 1  (predict for NP_001320556.1)
chlo 4,  chlo_mito 4,  mito 3,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_172145.1)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for NP_001320555.1)
scret 7,  other 3  (predict for NP_001320556.1)
mito 3  (predict for NP_172145.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G06580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein [detail] 834619
5.5 AT5G61990 Pentatricopeptide repeat (PPR) superfamily protein [detail] 836320
5.5 AT1G03560 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 839458
5.1 MEF8S Pentatricopeptide repeat (PPR) superfamily protein [detail] 829380
4.6 AT1G67792 [detail] 6240628
4.4 AT1G61460 G-type lectin S-receptor-like Serine/Threonine-kinase [detail] 842440
Coexpressed
gene list		 [Coexpressed gene list for AT1G06580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262627_at
262627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262627_at
262627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262627_at
262627_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837169      
Refseq ID (protein) NP_001320555.1 
NP_001320556.1 
NP_172145.1 


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