ATTED-II : GeneID search result

[←][→] ath AT1G63080 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

IEA ISM

GO MF

KEGG

Protein

NP_001319297.1 NP_001321279.1 NP_176496.1

BLAST

NP_001319297.1 NP_001321279.1 NP_176496.1

Orthologous

[Ortholog page] AT3G16710 (ath) AT3G22470 (ath) AT4G26800 (ath) AT5G16640 (ath) AT5G41170 (ath) AT1G06580 (ath) AT1G12300 (ath) AT1G12620 (ath) RPF1 (ath) AT1G62590 (ath) RPF2 (ath) AT1G62680 (ath) NG1 (ath) AT1G62910 (ath) RPF3 (ath) AT1G63070 (ath) AT1G63130 (ath) AT1G63150 (ath) AT1G63330 (ath) AT1G63400 (ath) AT1G64580 (ath) AT1G12775 (ath) LOC7455414 (ppo) LOC7465949 (ppo) LOC7497413 (ppo) AT1G62914 (ath) AT1G64583 (ath) LOC11409172 (mtr) LOC11411617 (mtr) LOC11411874 (mtr) LOC11413784 (mtr) LOC11414076 (mtr) LOC11416151 (mtr) LOC11417300 (mtr) LOC11419137 (mtr) LOC11419300 (mtr) LOC11419320 (mtr) LOC11420208 (mtr) LOC11422222 (mtr) LOC11430397 (mtr) LOC11436467 (mtr) LOC11439118 (mtr) LOC25479607 (mtr) LOC25479611 (mtr) LOC25479678 (mtr) LOC25480002 (mtr) LOC25480323 (mtr) LOC25480558 (mtr) LOC25480855 (mtr) LOC25481060 (mtr) LOC25481299 (mtr) LOC25481803 (mtr) LOC25482431 (mtr) LOC25483258 (mtr) LOC25496585 (mtr) LOC25496655 (mtr) LOC25496724 (mtr) LOC25496733 (mtr) LOC25496736 (mtr) LOC25496740 (mtr) LOC25496751 (mtr) LOC25496764 (mtr) LOC25496765 (mtr) LOC25497066 (mtr) LOC25497290 (mtr) LOC25497361 (mtr) LOC100243276 (vvi) LOC100244236 (vvi) LOC100246659 (vvi) LOC100252034 (vvi) LOC100253509 (vvi) LOC100255400 (vvi) LOC100256928 (vvi) LOC100258882 (vvi) LOC100265584 (vvi) LOC100777512 (gma) LOC100777919 (gma) LOC100778062 (gma) LOC100778420 (gma) LOC100781818 (gma) LOC100789435 (gma) LOC100793769 (gma) LOC100795807 (gma) LOC100796249 (gma) LOC100807278 (gma) LOC100811076 (gma) LOC100811865 (gma) LOC100812093 (gma) LOC100813712 (gma) LOC100818504 (gma) LOC100852554 (vvi) LOC101244875 (sly) LOC101248205 (sly) LOC101256290 (sly) LOC101263217 (sly) LOC101266330 (sly) LOC102663208 (gma) LOC102669831 (gma) LOC103833524 (bra) LOC103836144 (bra) LOC103836146 (bra) LOC103836151 (bra) LOC103838039 (bra) LOC103838041 (bra) LOC103838174 (bra) LOC103838255 (bra) LOC103838258 (bra) LOC103838282 (bra) LOC103838376 (bra) LOC103839829 (bra) LOC103843088 (bra) LOC103843103 (bra) LOC103843107 (bra) LOC103843127 (bra) LOC103843546 (bra) LOC103846313 (bra) LOC103864061 (bra) LOC103866658 (bra) LOC103871206 (bra) LOC104879278 (vvi) LOC106796589 (gma) LOC112417994 (mtr) LOC112422668 (mtr) LOC112999808 (gma)

Subcellular
localization
wolf

chlo 5, chlo_mito 5, mito 4, cyto_mito 2	(predict for NP_001319297.1)
chlo 5, chlo_mito 5, mito 4, cyto_mito 2	(predict for NP_001321279.1)
chlo 5, chlo_mito 5, mito 4, cyto_mito 2	(predict for NP_176496.1)

Subcellular
localization
TargetP

mito 8	(predict for NP_001319297.1)
mito 8	(predict for NP_001321279.1)
mito 8	(predict for NP_176496.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G63080 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.5	AT1G12300	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	837784
5.2	AT1G12620	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	837818
4.4	AT4G26680	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	828775
4.3	RPF3	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	842594

Coexpressed
gene list

[Coexpressed gene list for AT1G63080]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

259692_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

259692_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

259692_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842611
Refseq ID (protein)	NP_001319297.1
	NP_001321279.1
	NP_176496.1

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