ATTED-II : GeneID search result

[←][→] ath AT3G16710 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

IEA ISM

GO MF

KEGG

Protein

NP_001325692.1 NP_188293.2

BLAST

NP_001325692.1 NP_188293.2

Orthologous

[Ortholog page] AT3G22470 (ath) AT4G26800 (ath) AT5G16640 (ath) AT5G41170 (ath) AT1G06580 (ath) AT1G12300 (ath) AT1G12620 (ath) RPF1 (ath) AT1G62590 (ath) RPF2 (ath) AT1G62680 (ath) NG1 (ath) AT1G62910 (ath) RPF3 (ath) AT1G63070 (ath) AT1G63080 (ath) AT1G63130 (ath) AT1G63150 (ath) AT1G63330 (ath) AT1G63400 (ath) AT1G64580 (ath) AT1G12775 (ath) LOC7455414 (ppo) LOC7465949 (ppo) LOC7497413 (ppo) AT1G62914 (ath) AT1G64583 (ath) LOC11409172 (mtr) LOC11411617 (mtr) LOC11411874 (mtr) LOC11413784 (mtr) LOC11414076 (mtr) LOC11416151 (mtr) LOC11417300 (mtr) LOC11419137 (mtr) LOC11419300 (mtr) LOC11419320 (mtr) LOC11420208 (mtr) LOC11422222 (mtr) LOC11430397 (mtr) LOC11436467 (mtr) LOC11439118 (mtr) LOC25479607 (mtr) LOC25479611 (mtr) LOC25479678 (mtr) LOC25480002 (mtr) LOC25480323 (mtr) LOC25480558 (mtr) LOC25480855 (mtr) LOC25481060 (mtr) LOC25481299 (mtr) LOC25481803 (mtr) LOC25482431 (mtr) LOC25483258 (mtr) LOC25496585 (mtr) LOC25496655 (mtr) LOC25496724 (mtr) LOC25496733 (mtr) LOC25496736 (mtr) LOC25496740 (mtr) LOC25496751 (mtr) LOC25496764 (mtr) LOC25496765 (mtr) LOC25497066 (mtr) LOC25497290 (mtr) LOC25497361 (mtr) LOC100243276 (vvi) LOC100244236 (vvi) LOC100246659 (vvi) LOC100252034 (vvi) LOC100253509 (vvi) LOC100255400 (vvi) LOC100256928 (vvi) LOC100258882 (vvi) LOC100265584 (vvi) LOC100777512 (gma) LOC100777919 (gma) LOC100778062 (gma) LOC100778420 (gma) LOC100781818 (gma) LOC100789435 (gma) LOC100793769 (gma) LOC100795807 (gma) LOC100796249 (gma) LOC100807278 (gma) LOC100811076 (gma) LOC100811865 (gma) LOC100812093 (gma) LOC100813712 (gma) LOC100818504 (gma) LOC100852554 (vvi) LOC101244875 (sly) LOC101248205 (sly) LOC101256290 (sly) LOC101263217 (sly) LOC101266330 (sly) LOC102663208 (gma) LOC102669831 (gma) LOC103833524 (bra) LOC103836144 (bra) LOC103836146 (bra) LOC103836151 (bra) LOC103838039 (bra) LOC103838041 (bra) LOC103838174 (bra) LOC103838255 (bra) LOC103838258 (bra) LOC103838282 (bra) LOC103838376 (bra) LOC103839829 (bra) LOC103843088 (bra) LOC103843103 (bra) LOC103843107 (bra) LOC103843127 (bra) LOC103843546 (bra) LOC103846313 (bra) LOC103864061 (bra) LOC103866658 (bra) LOC103871206 (bra) LOC104879278 (vvi) LOC106796589 (gma) LOC112417994 (mtr) LOC112422668 (mtr) LOC112999808 (gma)

Subcellular
localization
wolf

chlo 4, chlo_mito 4, mito 3, cyto_mito 1, cyto 1, extr 1, E.R. 1, cyto_E.R. 1	(predict for NP_001325692.1)
chlo 5, mito 3, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1	(predict for NP_188293.2)

Subcellular
localization
TargetP

mito 7, chlo 3	(predict for NP_001325692.1)
mito 7, chlo 3	(predict for NP_188293.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G16710 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.3	nMAT1	Intron maturase, type II family protein	[detail]	839880
4.9	RPF1	RNA processing FACTOR	[detail]	837825
4.7	AT4G19890	Pentatricopeptide repeat (PPR-like) superfamily protein	[detail]	10723133

Coexpressed
gene list

[Coexpressed gene list for AT3G16710]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258422_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258422_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258422_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	820923
Refseq ID (protein)	NP_001325692.1
Refseq ID (protein)	NP_188293.2

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