[←][→] ath   At5g48140 Gene
functional annotation
Function   Pectin lyase-like superfamily protein      
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (108 genes)
Protein NP_199625.1 
BLAST NP_199625.1 
Orthologous [Ortholog page] AT2G15450 (ath)  AT2G15460 (ath)  AT2G15470 (ath)  AT2G26620 (ath)  AT2G33160 (ath)  AT2G40310 (ath)  AT3G07820 (ath)  AT3G07830 (ath)  AT3G07840 (ath)  AT3G07850 (ath)  AT3G14040 (ath)  AT4G13760 (ath)  AT1G17150 (ath)  AT1G43080 (ath)  AT1G43090 (ath)  AT1G43100 (ath)  AT1G78400 (ath)  LOC4323970 (osa)  LOC4328617 (osa)  LOC4341242 (osa)  LOC4341243 (osa)  LOC4341514 (osa)  LOC4341515 (osa)  LOC7468605 (ppo)  LOC7477987 (ppo)  LOC7491350 (ppo)  LOC11415149 (mtr)  LOC11422898 (mtr)  LOC11427911 (mtr)  LOC11434881 (mtr)  LOC18105348 (ppo)  LOC18108395 (ppo)  LOC18108396 (ppo)  LOC18108397 (ppo)  LOC18109572 (ppo)  LOC18109574 (ppo)  LOC18109575 (ppo)  LOC25490499 (mtr)  LOC25500883 (mtr)  LOC100779447 (gma)  LOC100779556 (gma)  LOC100780097 (gma)  LOC100780628 (gma)  LOC100784156 (gma)  LOC100788863 (gma)  LOC100795460 (gma)  LOC100810484 (gma)  LOC100812594 (gma)  LOC100819348 (gma)  LOC101244096 (sly)  LOC101245486 (sly)  LOC101248339 (sly)  LOC101248624 (sly)  LOC101249384 (sly)  LOC101249539 (sly)  LOC101266692 (sly)  LOC101268588 (sly)  LOC103828990 (bra)  LOC103831485 (bra)  LOC103832320 (bra)  LOC103849010 (bra)  LOC103849020 (bra)  LOC103849039 (bra)  LOC103857474 (bra)  LOC103857926 (bra)  LOC103858095 (bra)  LOC103858475 (bra)  LOC103859243 (bra)  LOC103859244 (bra)  LOC103859245 (bra)  LOC103863172 (bra)  LOC103865247 (bra)  LOC103865787 (bra)  MF16 (bra)  LOC103870630 (bra)  LOC103872502 (bra)  LOC103874929 (bra)  LOC117132119 (bra)  LOC117132121 (bra)  LOC117132135 (bra)  LOC123132586 (tae)  LOC123136728 (tae)  LOC123144207 (tae)  LOC123148487 (tae)  LOC123152443 (tae)  LOC123152448 (tae)  LOC123159918 (tae)  LOC123160021 (tae)  LOC123160409 (tae)  LOC123160455 (tae)  LOC123166690 (tae)  LOC123166829 (tae)  LOC123166897 (tae)  LOC123168013 (tae)  LOC123402122 (hvu)  LOC123411381 (hvu)  LOC123411397 (hvu)  LOC123413477 (hvu)  LOC123439836 (hvu) 
Subcellular
localization
wolf
extr 7,  cyto 1,  chlo 1,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_199625.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_199625.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 8
Genes directly connected with AT5G48140 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.1 AT3G01240 splicing regulatory glutamine/lysine-rich-like protein [detail] 821219
16.2 AT5G39880 uncharacterized protein [detail] 833985
16.0 AT3G07820 Pectin lyase-like superfamily protein [detail] 819973
15.9 AT5G15110 Pectate lyase family protein [detail] 831363
10.4 AT1G76370 Protein kinase superfamily protein [detail] 843969
9.4 AT2G02720 Pectate lyase family protein [detail] 814801
8.9 AT3G02810 Protein kinase superfamily protein [detail] 821236
7.3 AT5G54095 proteoglycan-like protein [detail] 835496
7.1 AT5G26700 RmlC-like cupins superfamily protein [detail] 832719
Coexpressed
gene list		 [Coexpressed gene list for AT5G48140]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248714_at
248714_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248714_at
248714_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248714_at
248714_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834866      
Refseq ID (protein) NP_199625.1 


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