cis; AACAGCA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACAGCA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACAGCA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.43At4g36990heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4) ((AT-HSFB1, ATHSF4, HSF4)) HSF
0.42At1g63840zinc finger (C3HC4-type RING finger) family protein C3H
0.42At1g62300WRKY family transcription factor ((WRKY6)) WRKY
-0.41At3g60630scarecrow transcription factor family protein GRAS
-0.41At3g22780CXC domain protein (TSO1) ((TSO1)) CPP
0.41At3g04070no apical meristem (NAM) family protein NAC
0.40At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.40At3g29035no apical meristem (NAM) family protein NAC
-0.40At2g45190axial regulator YABBY1 (YABBY1) / abnormal floral organs protein (AFO) / filamentous flower protein (FIL) ((AFO, FIL, YAB1)) C2C2-YABBY

link to other 304 cis elements in ATTED

similar seq.
←AACAGCA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGCTGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACAGCA1.000.064
CCGTGTT0.610.08145
CGCGTTC0.600.06177