cis; ATGTCGG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ATGTCGG

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ATGTCGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.51At1g08900sugar transporter-related C2H2
0.49At1g76580SPL1-Related3 protein (SPL1R3) SBP
0.47At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.46At5g05410DRE-binding protein (DREB2A) ((DREB2A)) AP2-EREBP
0.45At2g47890zinc finger (B-box type) family protein C2C2-CO-like
0.44At1g46768AP2 domain-containing protein RAP2.1 (RAP2.1) AP2-EREBP
0.44At2g23340AP2 domain-containing transcription factor, putative AP2-EREBP
0.44At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.43At3g11020DRE-binding protein (DREB2B) ((DREB2B)) AP2-EREBP
0.42At5g03720heat shock transcription factor family protein ((AT-HSFA3)) HSF
0.42At1g49720ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) ((ABF1)) bZIP
0.41At1g78600zinc finger (B-box type) family protein C2C2-CO-like
0.41At4g01120G-box binding factor 2 (GBF2) ((GBF2)) bZIP
0.41At5g01380expressed protein Trihelix
0.40At4g25480DRE-binding protein (DREB1A) / CRT/DRE-binding factor 3 (CBF3) ((DREB1A)) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
ATGTCGG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCGACAT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ATGTCGG1.000.07111
GTCGGTC0.810.07175
TGCCGAC0.810.0830
GCCGACA0.790.08121
CCGACAT0.790.0788
GTCGGTA0.760.06189
TACGTGT0.710.0698
CACCGAC0.710.07198
AGACACG0.690.07112
TTACACG0.690.06113