cis; CCACACG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCACACG

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCACACG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.59At5g49450bZIP family transcription factor bZIP
0.58At1g21450scarecrow-like transcription factor 1 (SCL1) ((SCL1)) GRAS
0.58At4g33940zinc finger (C3HC4-type RING finger) family protein C3H
0.56At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.55At1g69490no apical meristem (NAM) family protein ((NAP)) NAC
0.53At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.53At2g38470WRKY family transcription factor ((WRKY33)) WRKY
-0.53At3g14740PHD finger family protein C2H2
-0.52At3g16870zinc finger (GATA type) family protein C2C2-Gata
-0.52At3g22780CXC domain protein (TSO1) ((TSO1)) CPP
-0.52At4g37750ovule development protein aintegumenta (ANT) ((ANT)) AP2-EREBP
0.50At5g39660Dof-type zinc finger domain-containing protein C2C2-Dof
0.50At3g52800zinc finger (AN1-like) family protein C2H2
-0.50At2g36010E2F transcription factor-3 (E2F3) ((E2F3)) E2F-DP
0.50At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox

link to other 304 cis elements in ATTED

similar seq.
CCACACG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGTGTGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCACACG1.000.0638
ACCTTCC0.770.0679
ATATATA0.770.1026
TCCTATA0.760.0655
TATATAT0.760.1026
TTACGCG0.750.07194
AACCGTG0.750.07113
TATATAA0.750.111
TATAAAC0.740.0814
TATAAAT0.740.1018