cis; TGCATGT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TGCATGT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TGCATGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.54At5g16070chaperonin, putative TCP
-0.53At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
-0.50At4g31920two-component responsive regulator family protein / response regulator family protein ((ARR10)) ARR-B
-0.49At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.46At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.45At2g44580zinc finger (C3HC4-type RING finger) family protein C3H
0.45At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
-0.45At1g14510PHD finger family protein Alfin-like
0.45At5g03720heat shock transcription factor family protein ((AT-HSFA3)) HSF
-0.44At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.44At3g11020DRE-binding protein (DREB2B) ((DREB2B)) AP2-EREBP
0.44At5g01380expressed protein Trihelix
0.43At3g02990heat shock factor protein 2 (HSF2) / heat shock transcription factor 2 (HSTF2) ((ATHSFA1E)) HSF
-0.43At4g29100ethylene-responsive family protein BHLH
-0.43At5g60690homeodomain-leucine zipper protein Revoluta (REV) / fascicular fiberless 1 (IFL1) ((IFL1, REV)) Homeobox

link to other 304 cis elements in ATTED

similar seq.
TGCATGT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACATGCA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TGCATGT1.000.0760
CATGTCA0.720.0733
CTCATGC0.710.0677
ATGCATG0.690.0856
CATGCAA0.690.0986
CCATGCA0.690.0862
TGCATGC0.620.0849