cis; ACTCCTG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACTCCTG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACTCCTG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.45At5g38895zinc finger (C3HC4-type RING finger) family protein C3H
0.44At2g21240expressed protein BBR%2FBPC
0.44At1g49720ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) ((ABF1)) bZIP
0.42At5g48250zinc finger (B-box type) family protein C2C2-CO-like
0.41At1g53320F-box family protein / tubby family protein (TULP7) TUB
0.41At1g28050zinc finger (B-box type) family protein C2C2-CO-like
0.41At1g74410zinc finger (C3HC4-type RING finger) family protein C3H
0.40At3g07650zinc finger (B-box type) family protein C2C2-CO-like
0.40At2g40350AP2 domain-containing transcription factor, putative (DREB2) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←ACTCCTG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CAGGAGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACTCCTG1.000.0656
CTCCAGA0.790.0754
GCCACGG0.790.06150
TCCAGAA0.770.07104
GCTGTAC0.770.0717
CCCTGGG0.760.06113
TCTAGAA0.750.1580
TTCTAGA0.720.1188
CCAGAAC0.700.06114
CTTCTAG0.690.1090