cis; AGCCCAA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
CGTGCAAGCCCAAAGGCCAATCGGCCCAGA -284MOTIFZMSBE1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AGCCCAA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AGCCCAA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.75At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.73At1g71260expressed protein WHIRLY
0.67At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
-0.66At1g08320bZIP family transcription factor bZIP
-0.64At3g52800zinc finger (AN1-like) family protein C2H2
0.63At3g52910expressed protein GRF
0.62At5g16070chaperonin, putative TCP
0.62At1g14410DNA-binding protein-related WHIRLY
-0.60At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
-0.59At5g67300myb family transcription factor MYB
0.59At3g22780CXC domain protein (TSO1) ((TSO1)) CPP
-0.58At1g19310zinc finger (C3HC4-type RING finger) family protein C3H
-0.58At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
-0.58At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
-0.58At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS

link to other 304 cis elements in ATTED

similar seq.
←AGCCCAA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TTGGGCT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AGCCCAA1.000.0776
AAGCCCA0.990.1084
GCCCAAA0.980.0778
AAAGCCC0.980.0778
AATGGGC0.980.0988
GCCCAAT0.980.0874
TGGGCTT0.980.0992
GGGCTTT0.980.0790
TAGGCCC0.980.0889
AGGCCCA0.980.1186