cis; CCCGCGG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCCGCGG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCCGCGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.50At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.49At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.48At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP
0.48At3g49530no apical meristem (NAM) family protein NAC
0.48At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.47At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.47At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.46At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.45At5g51190AP2 domain-containing transcription factor, putative AP2-EREBP
0.44At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.44At2g46400WRKY family transcription factor ((WRKY46)) WRKY
0.43At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.43At5g67300myb family transcription factor MYB
0.43At5g47220ethylene-responsive element-binding factor 2 (ERF2) ((ERF2)) AP2-EREBP
0.43At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←CCCGCGG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCGCGGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCCGCGG1.000.0814
ACCCGCG0.910.089
CCCTGGC0.770.09153