ATTED-II : GeneID search result

[←][→] ath AT4G31800 Gene

functional annotation

Function

WRKY DNA-binding protein 18

GO BP

GO:0050691 [list] [network] regulation of defense response to virus by host	(8 genes)	IGI
GO:0002237 [list] [network] response to molecule of bacterial origin	(34 genes)	IMP
GO:0010200 [list] [network] response to chitin	(142 genes)	IEP
GO:0009751 [list] [network] response to salicylic acid	(215 genes)	IEP
GO:0031347 [list] [network] regulation of defense response	(260 genes)	IMP
GO:0042742 [list] [network] defense response to bacterium	(399 genes)	IEP
GO:0050832 [list] [network] defense response to fungus	(517 genes)	IEP
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(10793 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0042802 [list] [network] identical protein binding	(288 genes)	IPI
GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	IDA IMP ISS
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001320110.1 NP_001329847.1 NP_567882.1

BLAST

NP_001320110.1 NP_001329847.1 NP_567882.1

Orthologous

[Ortholog page] WRKY27 (gma) WRKY60 (ath) WRKY40 (ath) LOC4328512 (osa) LOC4341678 (osa) LOC4347069 (osa) LOC7465416 (ppo) LOC7489150 (ppo) LOC7493230 (ppo) LOC11420490 (mtr) LOC11423335 (mtr) LOC11436565 (mtr) LOC25487980 (mtr) WRKY17 (gma) WRKY30 (gma) LOC100147737 (zma) WRKY56 (gma) LOC100253480 (vvi) LOC100264507 (vvi) LOC100279570 (zma) LOC100281342 (zma) WRKY40 (sly) LOC100798375 (gma) LOC100798500 (gma) LOC100807966 (gma) LOC100810978 (gma) WRKY45 (sly) LOC101246806 (sly) LOC101246812 (sly) WRKY46 (sly) LOC103629700 (zma) LOC103638821 (zma) LOC103647425 (zma) LOC103830462 (bra) LOC103832449 (bra) LOC103834590 (bra) WRKY18 (bra) WRKY40 (bra) WRKY1 (bra) WRKY1 (bra)

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for NP_001320110.1)
nucl 9, chlo 1, extr 1	(predict for NP_001329847.1)
nucl 10	(predict for NP_567882.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001320110.1)
other 6, chlo 4	(predict for NP_001329847.1)
other 6, chlo 4	(predict for NP_567882.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3
ath04626	Plant-pathogen interaction	2
ath00591	Linoleic acid metabolism	2
ath00592	alpha-Linolenic acid metabolism	2

Genes directly connected with WRKY18 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.0	GTR1	Major facilitator superfamily protein	[detail]	823951
5.8	IP5PII	myo-inositol polyphosphate 5-phosphatase 2	[detail]	827526
5.7	CYP94C1	cytochrome P450, family 94, subfamily C, polypeptide 1	[detail]	817315
4.5	GA2OX2	gibberellin 2-oxidase	[detail]	839883

Coexpressed
gene list

[Coexpressed gene list for WRKY18]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253485_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253485_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253485_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829308
Refseq ID (protein)	NP_001320110.1
	NP_001329847.1
	NP_567882.1

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