cis; CTCTAGA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTCTAGA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTCTAGA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.60At2g26150heat shock transcription factor family protein ((ATHSFA2)) HSF
0.54At3g63350heat shock transcription factor family protein ((AT-HSFA7B)) HSF
0.50At4g11660heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7) ((AT-HSFB2B)) HSF

link to other 304 cis elements in ATTED

similar seq.
←CTCTAGA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TCTAGAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTCTAGA1.000.1083
TCTAGAA0.880.1580
CTCCAGA0.840.0754
TTCTAGA0.820.1188
GCGAAGG0.820.0979
CTTCTAG0.810.1090
CTCTGGA0.800.0871
CCCTGGG0.800.06113
TCTGGAA0.790.0720
GCCACGG0.780.06150