cis; TCTCTAG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCTCTAG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCTCTAG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.57At2g26150heat shock transcription factor family protein ((ATHSFA2)) HSF
0.50At5g62020heat shock factor protein, putative (HSF6) / heat shock transcription factor, putative (HTSF6) ((AT-HSFB2A)) HSF
0.50At4g11660heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7) ((AT-HSFB2B)) HSF
0.47At3g10800bZIP transcription factor family protein bZIP
0.46At3g63350heat shock transcription factor family protein ((AT-HSFA7B)) HSF
0.45At5g04410no apical meristem (NAM) family protein ((NAC2)) NAC
0.41At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
-0.41At5g61420myb family transcription factor (MYB28) ((MYB28)) MYB
-0.41At4g17570zinc finger (GATA type) family protein C2C2-Gata
-0.40At1g19000myb family transcription factor MYB-related
0.40At3g28210zinc finger (AN1-like) family protein ((PMZ)) C2H2
0.40At5g05410DRE-binding protein (DREB2A) ((DREB2A)) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←TCTCTAG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CTAGAGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCTCTAG1.000.0784
CTCTAGA0.740.1083
CTCCAGA0.720.0754
TTCTGGA0.720.0782
TCTGGAA0.720.0720
TCTCGAA0.700.0640
CTAGAAG0.690.0641
CCCTGGG0.670.06113
TAGAACC0.660.0783
TTCTAGA0.650.1188