cis; CTCTATA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTCTATA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTCTATA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.69At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.68At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.67At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.63At5g47230ethylene-responsive element-binding factor 5 (ERF5) ((ATERF5)) AP2-EREBP
0.63At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.62At3g23250myb family transcription factor (MYB15) MYB
0.61At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.61At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP
0.61At5g63790no apical meristem (NAM) family protein NAC
0.61At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.61At3g52800zinc finger (AN1-like) family protein C2H2
0.60At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.60At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.60At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.59At1g28370ERF domain protein 11 (ERF11) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←CTCTATA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TATAGAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTCTATA1.000.107
TCTATAT0.930.111
CTATATA0.930.144
TCTCTAT0.900.0710
TATATAA0.880.111
ATAAATA0.860.0917
TATAAAT0.850.1018
CCTATAA0.840.0718
TCTATAA0.840.074
TATATAT0.830.1026