cis; TATATAA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
         TATATAA             TATABOX4 [ref]
      ATTTATATAAAT           D2GMAUX28 [ref]
AAKAATWYRTAWATAAAAMTTTTATWTA COREOS [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TATATAA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TATATAA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.67At3g52800zinc finger (AN1-like) family protein C2H2
0.61At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.61At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.60At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.60At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.58At5g67300myb family transcription factor MYB
0.58At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.58At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.57At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.57At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
-0.57At1g14410DNA-binding protein-related WHIRLY
0.57At5g47230ethylene-responsive element-binding factor 5 (ERF5) ((ATERF5)) AP2-EREBP
0.56At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.56At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.56At3g23250myb family transcription factor (MYB15) MYB

link to other 304 cis elements in ATTED

similar seq.
←TATATAA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TTATATA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TATATAA1.000.111
CTATATA0.970.144
ATATAAA0.970.092
TATATAT0.950.1026
ATATATA0.940.1026
TATAAAT0.940.1018
TCTATAT0.930.111
TATAAAC0.920.0814
CTATAAA0.900.1063
TCCTATA0.900.0655