cis; ATATAAA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
      ATTTATATAAAT           D2GMAUX28 [ref]
AAKAATWYRTAWATAAAAMTTTTATWTA COREOS [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ATATAAA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ATATAAA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.66At3g52800zinc finger (AN1-like) family protein C2H2
0.61At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.59At5g67300myb family transcription factor MYB
0.58At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.58At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.58At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
0.57At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.56At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.56At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
-0.56At1g14410DNA-binding protein-related WHIRLY
0.56At5g63790no apical meristem (NAM) family protein NAC
0.55At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.55At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.54At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
0.54At5g47230ethylene-responsive element-binding factor 5 (ERF5) ((ATERF5)) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←ATATAAA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TTTATAT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ATATAAA1.000.092
TATATAA0.970.111
TATATAT0.930.1026
CTATATA0.930.144
ATATATA0.930.1026
TATAAAC0.920.0814
TATAAAT0.920.1018
TCTATAT0.900.111
TCCTATA0.890.0655
CTATAAA0.890.1063