cis; CTATATA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTATATA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTATATA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.70At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.68At3g52800zinc finger (AN1-like) family protein C2H2
0.67At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.67At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.67At5g67300myb family transcription factor MYB
0.65At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.64At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.64At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.63At3g23250myb family transcription factor (MYB15) MYB
0.63At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.62At5g63790no apical meristem (NAM) family protein NAC
0.62At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.61At5g47230ethylene-responsive element-binding factor 5 (ERF5) ((ATERF5)) AP2-EREBP
0.60At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.60At4g01250WRKY family transcription factor ((WRKY22)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←CTATATA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TATATAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTATATA1.000.144
TCTATAT0.970.111
TATATAA0.970.111
TATATAT0.950.1026
TATAAAT0.940.1018
ATATATA0.930.1026
ATATAAA0.930.092
CTCTATA0.930.107
ATAAATA0.920.0917
CTATAAA0.910.1063