cis; TATAAAT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
     TATAAAT   TATABOX2 [ref] [ref]
    CTATAAATAC TATABOX1 [ref]
ATTTATATAAAT   D2GMAUX28 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TATAAAT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TATAAAT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.69At3g52800zinc finger (AN1-like) family protein C2H2
0.68At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.67At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.67At5g63790no apical meristem (NAM) family protein NAC
0.66At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.66At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.65At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.65At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.65At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.64At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.64At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.64At5g67300myb family transcription factor MYB
0.63At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.60At3g23250myb family transcription factor (MYB15) MYB
0.59At3g50260AP2 domain-containing transcription factor, putative AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←TATAAAT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ATTTATA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TATAAAT1.000.1018
ATAAATA0.970.0917
CTATAAA0.960.1063
CTATATA0.940.144
TATATAA0.940.111
TCCTATA0.930.0655
TATATAT0.930.1026
TCTATAT0.930.111
ATATAAA0.920.092
ATATATA0.920.1026