cis; TATAAAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TATAAAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TATAAAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.69At3g52800zinc finger (AN1-like) family protein C2H2
0.69At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.67At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.66At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.65At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.65At5g63790no apical meristem (NAM) family protein NAC
0.65At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.65At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.64At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.61At3g49530no apical meristem (NAM) family protein NAC
0.61At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.61At3g23250myb family transcription factor (MYB15) MYB
0.61At5g67300myb family transcription factor MYB
0.60At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.60At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←TATAAAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTTTATA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TATAAAC1.000.0814
ATATAAA0.920.092
TATATAA0.920.111
TATAAAT0.890.1018
TATATAT0.890.1026
ATATATA0.880.1026
CTATATA0.880.144
CTATAAA0.880.1063
TCCTATA0.870.0655
TCTATAT0.840.111