cis; TCCTATA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCCTATA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCCTATA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.63At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.63At3g52800zinc finger (AN1-like) family protein C2H2
0.62At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
0.59At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.58At5g67300myb family transcription factor MYB
0.57At1g69570Dof-type zinc finger domain-containing protein C2C2-Dof
0.57At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.57At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.57At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.55At1g22190AP2 domain-containing transcription factor, putative AP2-EREBP
0.55At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.54At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.54At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.54At5g39660Dof-type zinc finger domain-containing protein C2C2-Dof
0.53At2g46830myb-related transcription factor (CCA1) ((CCA1)) MYB-related

link to other 304 cis elements in ATTED

similar seq.
TCCTATA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TATAGGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCCTATA1.000.0655
TATAAAT0.930.1018
TATATAT0.910.1026
CTATATA0.910.144
TATATAA0.900.111
ATAAATA0.900.0917
ATATATA0.900.1026
TCTATAT0.900.111
ATATAAA0.890.092
CTATAAA0.890.1063