cis; TTCTATA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TTCTATA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TTCTATA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.41At5g58010basic helix-loop-helix (bHLH) family protein BHLH

link to other 304 cis elements in ATTED

similar seq.
←TTCTATA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TATAGAA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TTCTATA1.000.0630
CTATAAA0.900.1063
TATATAT0.870.1026
TCTATAA0.860.074
TATAAAT0.860.1018
ATATATA0.850.1026
ATATAAA0.840.092
TCTATAT0.840.111
CTATATA0.830.144
TATAAAA0.830.0666