cis; TATAAAA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
   GTACGTGTTATAAAACGTGT      WARBNEXTA [ref]
AAKAATWYRTAWATAAAAMTTTTATWTA COREOS [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TATAAAA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TATAAAA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.62At1g14410DNA-binding protein-related WHIRLY
0.61At3g52800zinc finger (AN1-like) family protein C2H2
-0.59At1g71260expressed protein WHIRLY
-0.58At3g52910expressed protein GRF
0.57At1g08320bZIP family transcription factor bZIP
-0.57At3g22780CXC domain protein (TSO1) ((TSO1)) CPP
0.56At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.56At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.55At3g43430zinc finger (C3HC4-type RING finger) family protein C3H
0.55At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.54At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.54At2g38470WRKY family transcription factor ((WRKY33)) WRKY
-0.53At4g04890homeobox-leucine zipper protein protodermal factor 2 (PDF2) ((PDF2)) Homeobox
0.53At3g04060no apical meristem (NAM) family protein NAC
0.53At5g63790no apical meristem (NAM) family protein NAC

link to other 304 cis elements in ATTED

similar seq.
←TATAAAA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TTTTATA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TATAAAA1.000.0666
ATATAAA0.830.092
TTCTATA0.830.0630
TATATAT0.830.1026
CTATAAA0.810.1063
ATATATA0.810.1026
TATATAA0.790.111
CTATATA0.780.144
TATAAAT0.770.1018
TCCTATA0.760.0655