cis; ATAAATA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
           CTATAAATAC             TATABOX1 [ref]
AATAATAATAATAATAAATA              C2GMAUX28 [ref]
       AAATAGATAAATAAAAACATT      3AF1BOXPSRBCS3 [ref] [ref]
            AATAAAYAAA            MARABOX1
     AAKAATWYRTAWATAAAAMTTTTATWTA COREOS [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ATAAATA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ATAAATA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At3g52800zinc finger (AN1-like) family protein C2H2
0.65At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.64At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.63At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.63At5g63790no apical meristem (NAM) family protein NAC
0.63At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.63At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.63At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.63At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.62At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.61At5g49520WRKY family transcription factor ((WRKY48)) WRKY
-0.61At3g22780CXC domain protein (TSO1) ((TSO1)) CPP
0.61At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.61At5g67300myb family transcription factor MYB
0.60At1g08320bZIP family transcription factor bZIP

link to other 304 cis elements in ATTED

similar seq.
←ATAAATA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TATTTAT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ATAAATA1.000.0917
TATAAAT0.970.1018
TCTATAT0.920.111
CTATATA0.920.144
CTATAAA0.910.1063
TATATAA0.900.111
TCCTATA0.900.0655
TCTATAA0.900.074
TAAATAG0.890.072
CCTATAA0.880.0718