cis; GGCCCCC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GGCCCCC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GGCCCCC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.51At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.51At5g47230ethylene-responsive element-binding factor 5 (ERF5) ((ATERF5)) AP2-EREBP
0.51At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.48At3g23250myb family transcription factor (MYB15) MYB
0.48At5g51190AP2 domain-containing transcription factor, putative AP2-EREBP
0.48At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.48At2g46400WRKY family transcription factor ((WRKY46)) WRKY
0.48At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.47At1g42990bZIP transcription factor family protein bZIP
0.45At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.45At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.45At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.44At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP
0.44At3g49530no apical meristem (NAM) family protein NAC
0.43At1g28370ERF domain protein 11 (ERF11) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←GGCCCCC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GGGGGCC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GGCCCCC1.000.07119
CCACACA0.680.0753
AGCCACA0.640.0653