cis; AGCCACA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 GCCAC  SORLIP1AT [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AGCCACA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AGCCACA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.61At3g02830zinc finger (CCCH-type) family protein ((ZFN1)) C2H2
0.60At5g20220zinc knuckle (CCHC-type) family protein C2H2
0.52At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.50At3g13040myb family transcription factor G2-like
0.49At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.47At4g00050basic helix-loop-helix (bHLH) family protein BHLH
0.47At5g16540zinc finger (CCCH-type) family protein ((ZFN3)) C2H2
0.46At2g21320zinc finger (B-box type) family protein C2C2-CO-like
0.46At5g44190myb family transcription factor (GLK2) ((GLK2, GPRI2)) G2-like
0.45At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.45At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.45At5g56860zinc finger (GATA type) family protein C2C2-Gata
0.44At3g59060basic helix-loop-helix (bHLH) family protein ((PIL6)) BHLH
0.44At2g31070TCP family transcription factor, putative TCP
-0.43At2g34140Dof-type zinc finger domain-containing protein C2C2-Dof

link to other 304 cis elements in ATTED

similar seq.
AGCCACA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGTGGCT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AGCCACA1.000.0653
CCACACA0.890.0753
GATAAGG0.870.0739
AGATAAG0.870.0838
ATCCACA0.870.0653
CTTATCT0.870.0821
ACCTTAT0.860.0660
TATCCAC0.840.0753
CCTTATC0.840.1017
TAGCCAC0.840.0759