cis; AGATAAG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 GATAAG IBOX [ref] [ref] [ref]
 GATAA  IBOXCORE
 GATA   GATABOX [ref] [ref] [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AGATAAG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AGATAAG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.62At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.59At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.54At5g20220zinc knuckle (CCHC-type) family protein C2H2
0.53At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.53At1g19000myb family transcription factor MYB-related
0.52At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.52At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.49At5g56860zinc finger (GATA type) family protein C2C2-Gata
0.49At2g18300basic helix-loop-helix (bHLH) family protein BHLH
0.49At3g13040myb family transcription factor G2-like
0.49At3g02830zinc finger (CCCH-type) family protein ((ZFN1)) C2H2
0.49At2g20180basic helix-loop-helix (bHLH) family protein ((PIL5)) BHLH
0.48At3g59060basic helix-loop-helix (bHLH) family protein ((PIL6)) BHLH
0.48At4g00050basic helix-loop-helix (bHLH) family protein BHLH
0.47At4g01460basic helix-loop-helix (bHLH) family protein BHLH

link to other 304 cis elements in ATTED

similar seq.
←AGATAAG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CTTATCT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AGATAAG1.000.0838
GATAAGG0.970.0739
CCTTATC0.950.1017
CTTATCT0.950.0821
GATAAGA0.950.0742
TCTTATC0.940.0923
AAGATAA0.940.0641
CTTATCC0.930.1153
TATCCAC0.920.0753
ATCTTAT0.920.0723