cis; GATAAGG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
GATAAGR IBOXCORENT [ref]
GATAAG  IBOX [ref] [ref] [ref]
GATAA   IBOXCORE
GATA    GATABOX [ref] [ref] [ref] [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GATAAGG

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GATAAGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.62At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.59At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.57At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.54At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.54At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.52At2g18300basic helix-loop-helix (bHLH) family protein BHLH
0.51At5g56860zinc finger (GATA type) family protein C2C2-Gata
0.49At5g20220zinc knuckle (CCHC-type) family protein C2H2
0.49At4g01460basic helix-loop-helix (bHLH) family protein BHLH
0.48At1g22590MADS-box family protein MADS
0.47At3g02830zinc finger (CCCH-type) family protein ((ZFN1)) C2H2
0.47At5g60970TCP family transcription factor, putative TCP
0.47At5g63470CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
0.47At2g41940zinc finger (C2H2 type) family protein ((ZFP8)) C2H2
0.46At2g02450no apical meristem (NAM) family protein NAC

link to other 304 cis elements in ATTED

similar seq.
GATAAGG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCTTATC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GATAAGG1.000.0739
AGATAAG0.970.0838
CCTTATC0.950.1017
CTTATCT0.950.0821
TCTTATC0.950.0923
CTTATCC0.940.1153
TATCCAC0.940.0753
ATCTTAT0.930.0723
AAGATAA0.930.0641
TTATCCA0.920.1054