cis; TTATCCA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TTATCC  SREATMSD [ref]
 TATCCA TATCCAOSAMY [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TTATCCA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TTATCCA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.68At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.62At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.61At2g18300basic helix-loop-helix (bHLH) family protein BHLH
0.58At5g63470CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
0.57At5g61590AP2 domain-containing transcription factor family protein AP2-EREBP
0.57At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.51At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.51At2g02450no apical meristem (NAM) family protein NAC
0.51At2g17450zinc finger (C3HC4-type RING finger) family protein ((RHA3A)) C3H
0.51At1g67910expressed protein CAMTA
0.50At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.50At2g43010phytochrome-interacting factor 4 (PIF4) / basic helix-loop-helix protein 9 (bHLH9) / short under red-light 2 (SRL2) ((PIF4)) BHLH
0.50At3g19860basic helix-loop-helix (bHLH) family protein BHLH
0.49At5g49450bZIP family transcription factor bZIP
-0.49At3g11200PHD finger family protein Alfin-like

link to other 304 cis elements in ATTED

similar seq.
TTATCCA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGGATAA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TTATCCA1.000.1054
CTTATCC0.970.1153
TATCCAC0.950.0753
TCTTATC0.950.0923
ATCTTAT0.940.0723
CTTATCT0.940.0821
GATAAGG0.920.0739
ATCCACA0.920.0653
GGATAAG0.920.0689
AGATAAG0.910.0838