cis; TATCCAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TATCCAC TATCCACHVAL21 [ref] [ref]
TATCCAY TATCCAYMOTIFOSRAMY3D [ref]
TATCCA  TATCCAOSAMY [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TATCCAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TATCCAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.70At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.61At5g63780zinc finger (C3HC4-type RING finger) family protein C3H
0.61At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.60At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.56At4g01460basic helix-loop-helix (bHLH) family protein BHLH
0.55At2g26580plant-specific transcription factor YABBY family protein C2C2-YABBY
0.53At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.53At2g02070zinc finger (C2H2 type) family protein C2H2
0.52At5g63470CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
0.52At4g32980homeobox protein (ATH1) ((ATH1)) Homeobox
0.52At1g12860basic helix-loop-helix (bHLH) family protein / F-box family protein BHLH
0.51At2g01760two-component responsive regulator family protein / response regulator family protein ((ARR14)) ARR-B
0.50At3g02830zinc finger (CCCH-type) family protein ((ZFN1)) C2H2
-0.50At4g36990heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4) ((AT-HSFB1, ATHSF4, HSF4)) HSF
0.49At2g18300basic helix-loop-helix (bHLH) family protein BHLH

link to other 304 cis elements in ATTED

similar seq.
←TATCCAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTGGATA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TATCCAC1.000.0753
TTATCCA0.950.1054
CCTTATC0.950.1017
CTTATCC0.940.1153
CTTATCT0.940.0821
GATAAGG0.940.0739
ATCTTAT0.930.0723
TCTTATC0.930.0923
AGATAAG0.920.0838
TGGATAA0.910.0712