cis; GCCCCCG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GCCCCCG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GCCCCCG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.41At5g48250zinc finger (B-box type) family protein C2C2-CO-like

link to other 304 cis elements in ATTED

similar seq.
←GCCCCCG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGGGGGC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GCCCCCG1.000.08119
TTGACCA0.670.06103
TTTGACT0.640.0897
TCTATAT0.610.111
AAGTCAA0.610.08125
CCTATAA0.600.0718