cis; TTGACCA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TTGACC  ELRECOREPCRP1 [ref] [ref] [ref] [ref] [ref] [ref]
TTGAC   WBOXATNPR1 [ref] [ref]
 TGACY  WBOXNTERF3 [ref]
 TGAC   WRKY71OS [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TTGACCA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TTGACCA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.73At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.70At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.69At1g42990bZIP transcription factor family protein bZIP
0.67At3g10500no apical meristem (NAM) family protein NAC
0.66At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.65At5g13080WRKY family transcription factor ((WRKY75)) WRKY
0.65At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.64At2g43000no apical meristem (NAM) family protein NAC
0.64At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.63At5g63790no apical meristem (NAM) family protein NAC
0.62At3g01970WRKY family transcription factor ((WRKY45)) WRKY
0.61At5g24110WRKY family transcription factor ((WRKY30)) WRKY
0.60At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.59At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.58At2g33710AP2 domain-containing transcription factor family protein AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←TTGACCA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGGTCAA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TTGACCA1.000.06103
AAGTCAA0.890.08125
AAAAGTC0.880.08170
TGACTTT0.850.0875
TTTGACT0.850.0897
TTGACTT0.850.0983
AAAGTCA0.830.08184
AGTCAAC0.810.0780
GACTTTT0.810.08142
GTTGACT0.780.0691