cis; TTTGACT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
                TTTGACT    WBBOXPCWRKY1 [ref] [ref]
TGTGACATTGAAATTCTTTGACTTTA YREGIONNTPRB1B [ref]
                 TTGAC     WBOXATNPR1 [ref] [ref]
                  TGACT    WBOXHVISO1 [ref]
                  TGACY    WBOXNTERF3 [ref]
                  TGAC     WRKY71OS [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TTTGACT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TTTGACT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.82At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.77At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.72At1g42990bZIP transcription factor family protein bZIP
0.71At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.70At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.69At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.68At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.68At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.68At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.67At5g63790no apical meristem (NAM) family protein NAC
0.67At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.67At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.67At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.67At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.66At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←TTTGACT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGTCAAA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TTTGACT1.000.0897
TTGACTT0.900.0983
TGACTTT0.860.0875
AAGTCAA0.860.08125
ACTTTGA0.850.0692
TTGACCA0.850.06103
AAAGTCA0.810.08184
GCCGCCT0.800.07106
AGTCAAC0.800.0780
AAAAGTC0.790.08170