cis; AAAAGTC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 AAAG   DOFCOREZM [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AAAAGTC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AAAAGTC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.60At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.59At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.57At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.57At3g10500no apical meristem (NAM) family protein NAC
0.57At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.56At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.56At2g43000no apical meristem (NAM) family protein NAC
0.56At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.54At1g42990bZIP transcription factor family protein bZIP
0.54At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.53At4g01720WRKY family transcription factor ((WRKY47)) WRKY
0.53At2g30250WRKY family transcription factor ((WRKY25)) WRKY
-0.52At5g46690basic helix-loop-helix (bHLH) family protein BHLH
0.51At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.50At3g50260AP2 domain-containing transcription factor, putative AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
AAAAGTC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GACTTTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AAAAGTC1.000.08170
AAAGTCA0.910.08184
AAGTCAA0.890.08125
TTGACCA0.880.06103
TGACTTT0.850.0875
TTGACTT0.820.0983
AGTCAAC0.800.0780
GACTTTT0.800.08142
TAACGCG0.800.0762
TTTGACT0.790.0897