cis; TGACTTT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
                  TGACTTTCTGAC TDBA12NTCHN50 [ref]
TGTGACATTGAAATTCTTTGACTTTA     YREGIONNTPRB1B [ref]
                  TGACT        WBOXHVISO1 [ref]
                  TGACY        WBOXNTERF3 [ref]
                  TGAC         WRKY71OS [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TGACTTT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TGACTTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.75At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.73At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.72At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.71At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.70At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.68At1g42990bZIP transcription factor family protein bZIP
0.67At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.65At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.65At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.64At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.62At5g24110WRKY family transcription factor ((WRKY30)) WRKY
0.62At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.60At5g63790no apical meristem (NAM) family protein NAC
0.59At3g10500no apical meristem (NAM) family protein NAC
0.58At4g01720WRKY family transcription factor ((WRKY47)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←TGACTTT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AAAGTCA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TGACTTT1.000.0875
TTGACTT0.960.0983
AAGTCAA0.920.08125
AGTCAAC0.910.0780
GACTTTT0.880.08142
ACTTTGA0.880.0692
TTTGACT0.860.0897
GTTGACT0.850.0691
TTGACCA0.850.06103
AAAAGTC0.850.08170