cis; GACTTTT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GACTTTT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GACTTTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.72At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.71At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.71At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.69At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.69At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.69At1g42990bZIP transcription factor family protein bZIP
0.67At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.67At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.66At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.63At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.61At1g08930early-responsive to dehydration stress protein (ERD6) / sugar transporter family protein ((ERD6)) C2H2
0.61At5g63790no apical meristem (NAM) family protein NAC
0.60At3g10500no apical meristem (NAM) family protein NAC
0.60At5g24110WRKY family transcription factor ((WRKY30)) WRKY
0.59At4g01720WRKY family transcription factor ((WRKY47)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←GACTTTT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AAAAGTC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GACTTTT1.000.08142
AAGTCAA0.880.08125
TTGACTT0.880.0983
TGACTTT0.880.0875
AGTCAAC0.860.0780
GTTGACT0.860.0691
ACTTTGA0.830.0692
TTGACCA0.810.06103
AAAAGTC0.800.08170
TTTGACT0.790.0897