cis; AGTCAAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AGTCAAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AGTCAAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.72At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.70At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.68At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.67At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.66At1g42990bZIP transcription factor family protein bZIP
0.66At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.65At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.65At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.64At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.62At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.61At5g24110WRKY family transcription factor ((WRKY30)) WRKY
0.58At1g67970heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5) ((AT-HSFA8)) HSF
0.58At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.56At3g10500no apical meristem (NAM) family protein NAC
0.56At5g63790no apical meristem (NAM) family protein NAC

link to other 304 cis elements in ATTED

similar seq.
←AGTCAAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTTGACT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AGTCAAC1.000.0780
AAGTCAA0.920.08125
TTGACTT0.920.0983
TGACTTT0.910.0875
GTTGACT0.890.0691
GACTTTT0.860.08142
ACTTTGA0.830.0692
AAAGTCA0.820.08184
TTGACCA0.810.06103
AAAAGTC0.800.08170