cis; ACTTTGA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
ACTTTG  TBOXATGAPB [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACTTTGA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACTTTGA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.58At5g24110WRKY family transcription factor ((WRKY30)) WRKY
0.56At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.55At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.55At1g42990bZIP transcription factor family protein bZIP
0.54At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.51At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.50At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.49At5g46350WRKY family transcription factor ((WRKY8)) WRKY
0.48At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.47At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.46At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.45At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.45At2g17040no apical meristem (NAM) family protein NAC
0.45At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.45At2g43000no apical meristem (NAM) family protein NAC

link to other 304 cis elements in ATTED

similar seq.
←ACTTTGA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TCAAAGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACTTTGA1.000.0692
TTGACTT0.900.0983
TGACTTT0.880.0875
TTTGACT0.850.0897
AAGTCAA0.840.08125
AGTCAAC0.830.0780
GACTTTT0.830.08142
GTTGACT0.820.0691
AGCCGCC0.810.06123
GCCGCCT0.770.07106