cis; GTTGACT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 TTGAC  WBOXATNPR1 [ref] [ref]
  TGACT WBOXHVISO1 [ref]
  TGACY WBOXNTERF3 [ref]
  TGAC  WRKY71OS [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GTTGACT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GTTGACT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.62At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.60At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.60At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.60At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.60At1g42990bZIP transcription factor family protein bZIP
0.60At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.59At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.58At3g54620bZIP transcription factor family protein ((BZO2H4)) bZIP
0.57At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.57At1g21450scarecrow-like transcription factor 1 (SCL1) ((SCL1)) GRAS
0.57At4g01720WRKY family transcription factor ((WRKY47)) WRKY
0.55At3g10500no apical meristem (NAM) family protein NAC
0.54At5g24110WRKY family transcription factor ((WRKY30)) WRKY
0.54At4g36990heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4) ((AT-HSFB1, ATHSF4, HSF4)) HSF

link to other 304 cis elements in ATTED

similar seq.
←GTTGACT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGTCAAC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GTTGACT1.000.0691
TTGACTT0.900.0983
AGTCAAC0.890.0780
AAGTCAA0.880.08125
GACTTTT0.860.08142
TGACTTT0.850.0875
ACTTTGA0.820.0692
TTGACCA0.780.06103
TTTGACT0.760.0897
AAAGTCA0.750.08184