cis; TAATGGG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
ATAATGGGCCACACTGTGGGGCAT SE1PVGRP18 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TAATGGG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TAATGGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.63At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.60At1g71260expressed protein WHIRLY
0.57At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.56At5g16070chaperonin, putative TCP
0.50At1g14410DNA-binding protein-related WHIRLY
0.50At2g02740transcription factor, putative WHIRLY
0.49At3g52910expressed protein GRF
-0.49At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
0.47At1g27050homeobox-leucine zipper family protein Homeobox
0.47At5g02470DP-2 transcription factor, putative (DPA) ((DPA)) E2F-DP
-0.46At2g37150zinc finger (C3HC4-type RING finger) family protein C3H
-0.46At1g19310zinc finger (C3HC4-type RING finger) family protein C3H
0.45At1g72050zinc finger (C2H2 type) family protein C2H2
0.42At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.42At2g24500zinc finger (C2H2 type) family protein ((FZF)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←TAATGGG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCCATTA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TAATGGG1.000.0789
AATGGGC0.980.0988
ATGGGCC0.980.0987
AAGCCCA0.970.1084
GGCCCAA0.970.0962
ATGGGCT0.970.08100
TGGGCCT0.970.1096
AGGCCCA0.970.1186
GCCCAAA0.970.0778
TGGGCTT0.970.0992