cis; TATTGGG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TATTGGG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TATTGGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.58At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.58At1g71260expressed protein WHIRLY
0.53At3g52910expressed protein GRF
0.50At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.49At5g16070chaperonin, putative TCP
0.48At1g14410DNA-binding protein-related WHIRLY
-0.45At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
-0.44At3g52800zinc finger (AN1-like) family protein C2H2
0.44At5g05610PHD finger family protein Alfin-like
-0.44At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.44At5g02470DP-2 transcription factor, putative (DPA) ((DPA)) E2F-DP
-0.43At5g55970zinc finger (C3HC4-type RING finger) family protein C3H
0.43At2g02740transcription factor, putative WHIRLY
0.43At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.43At3g06740zinc finger (GATA type) family protein C2C2-Gata

link to other 304 cis elements in ATTED

similar seq.
←TATTGGG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCCAATA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TATTGGG1.000.07109
ATTGGGC0.980.0999
TTGGGCC0.970.0998
TGGGCCT0.960.1096
TTGGGCT0.960.0780
GGGCCTT0.960.0796
TGGGCTT0.960.0992
TAGGCCC0.950.0889
GGGCTTT0.950.0790
TGGGCCG0.950.0689