cis; ATTGGGC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ATTGGGC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ATTGGGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.68At1g71260expressed protein WHIRLY
0.67At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.61At3g52910expressed protein GRF
-0.61At3g52800zinc finger (AN1-like) family protein C2H2
0.57At1g14410DNA-binding protein-related WHIRLY
0.57At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
-0.56At1g08320bZIP family transcription factor bZIP
-0.56At5g67300myb family transcription factor MYB
-0.56At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.55At5g16070chaperonin, putative TCP
-0.54At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
-0.54At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
-0.51At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
-0.51At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.51At5g05610PHD finger family protein Alfin-like

link to other 304 cis elements in ATTED

similar seq.
ATTGGGC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCCCAAT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ATTGGGC1.000.0999
TTGGGCC0.990.0998
TATTGGG0.980.07109
TGGGCCT0.970.1096
TTGGGCT0.970.0780
GGGCCTT0.960.0796
TGGGCCG0.960.0689
TGGGCTT0.960.0992
ATGGGCC0.950.0987
GGGCTTT0.950.0790