cis; TGCATGC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TCCATGCATGCAC RYREPEAT4 [ref] [ref] [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TGCATGC

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TGCATGC.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.51At5g07500zinc finger (CCCH-type) family protein ((PEI1)) C2H2
0.51At5g07680no apical meristem (NAM) family protein NAC
0.50At3g02940myb family transcription factor (MYB107) ((MYB107)) MYB
0.50At3g26790transcriptional regulator (FUSCA3) ((FUS3)) ABI3VP1
0.48At3g24650abscisic acid-insensitive protein 3 (ABI3) ((ABI3)) ABI3VP1
0.47At3g44460basic leucine zipper transcription factor (BZIP67) ((DPBF2)) bZIP
0.47At3g20910CCAAT-binding transcription factor (CBF-B/NF-YA) family protein CCAAT-HAP2
0.46At1g72830CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2C)) CCAAT-HAP2
0.45At1g43640F-box family protein / tubby family protein TUB
0.45At2g24430no apical meristem (NAM) family protein NAC
0.45At1g28470no apical meristem (NAM) family protein NAC
0.45At2g41070basic leucine zipper transcription factor (BZIP12) ((DPBF4, EEL)) bZIP
0.44At5g39610no apical meristem (NAM) family protein NAC
0.44At3g15510no apical meristem (NAM) family protein (NAC2) ((ATNAC2)) NAC
0.44At5g47670CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) CCAAT-HAP3

link to other 304 cis elements in ATTED

similar seq.
←TGCATGC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCATGCA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TGCATGC1.000.0849
GCATGCA0.860.0650
ATGCATG0.790.0856
CATGCAT0.700.0743
CATGCAA0.680.0986
TGCATGT0.620.0760
CCATGCA0.600.0862
CTCATGC0.600.0677